Articles

Saglam-Metiner, P., Yildirim, E., Dincer, C., Basak, O., & Yesil-Celiktas, O. (2024). Humanized brain organoids-on-chip integrated with sensors for screening neuronal activity and neurotoxicity. Microchimica Acta, 191(1), 1-25.https://link.springer.com/article/10.1007/s00604-023-06165-4

Sen-Dogan, B., Yildirim, E., Sahin, S., Ozgur, E., Zorlu, O., & Kulah, H. (2023). "Design of a microfluidic device for immunoaffinity-based isolation of circulating tumor cells with minimal clogging." Sensors and Actuators Reports, 6, 100169.Design of a microfluidic device for immunoaffinity-based isolation of circulating tumor cells with minimal clogging - ScienceDirect

Sen-Dogan, B., Demir, M. A., Sahin, B., Yildirim, E., Karayalcin, G., Sahin, S., ... (2023). "Analytical Validation of a Spiral Microfluidic Chip with Hydrofoil-Shaped Pillars for the Enrichment of Circulating Tumor Cells." Biosensors, 13(10), 938.Biosensors | Free Full-Text | Analytical Validation of a Spiral Microfluidic Chip with Hydrofoil-Shaped Pillars for the Enrichment of Circulating Tumor Cells (mdpi.com)

Yildirim, E., Ulku, M. K., Arikan, M. A. S. (2023). "Utilization of Cross-Correlation Function for Assessment of Replication Quality in Ultrasonic Embossing of Microchannels on Polymethyl Methacrylate (PMMA)."https://assets.researchsquare.com/files/rs-3327556/v1/4593d09f-526e-4e10-a051-f973ecad3154.pdf?c=1694711000

Acikgoz, H. N., Karaman, A., Sahin, M. A., Caylan, O. R., Buke, G. C., Yildirim, E., ... (2023). "Assessment of silicon, glass, FR4, PDMS and PMMA as a chip material for acoustic particle/cell manipulation in microfluidics." Ultrasonics, 129, 106911.Assessment of silicon, glass, FR4, PDMS and PMMA as a chip material for acoustic particle/cell manipulation in microfluidics (bilkent.edu.tr)

Torul, H., Arslan, Z. Ç., Tezcan, T., Kayiş, E. Ç., Çalımcı, M., Gumustas, A., ... (2023). "Microfluidic-based blood immunoassays." Journal of Pharmaceutical and Biomedical Analysis, 115313.https://www.sciencedirect.com/science/article/abs/pii/S0731708523000821

Manoharan, V., Rodrigues, R., Sadati, S., Swann, M. J., Freeman, N., Du, B., ... (2023). "Platform-agnostic electrochemical sensing app and companion potentiostat." Analyst, 148(19), 4857-4868.https://pubs.rsc.org/en/content/articlehtml/2023/an/d2an01350a

Dogan, Ü., Sucularlı, F., Yildirim, E., Cetin, D., Suludere, Z., Boyaci, I. H., Tamer, U. (2022). "Escherichia coli Enumeration in a Capillary-Driven Microfluidic Chip with SERS." Biosensors, 12(9), 765.https://www.mdpi.com/2079-6374/12/9/765

Kaya, A., Öner, G., Ergüven, Ö. F., Yildirim, E., Almus, F. G. (2022). "Analysis of Acoustically Actuated Sedimentation Prevention System for Syringe Pumps."https://open.metu.edu.tr/handle/11511/99007

Koyuncu, E., Kocum, A. T., Koc, E., Küçükgenc, C., Kurtoglu, B., ... (2022). "Design of An Anti-Sedimentation Syringe Pump for Microfluidics Applications."https://open.metu.edu.tr/handle/11511/98990

Şahin, B., Karayalçın, G., Toral, T., Sen Dogan, B., Ozgur, E., Zorlu, Ö., ... (2022). "A microfluidic platform for real-time enumeration and retrieval of low number of cells."https://open.metu.edu.tr/handle/11511/99247

Farahani, S., Gumustas, A., Ulku, M. K., Tamer, U., Arıkan, M. A. S., ... (2022). "An ultrasonic assisted method for fabricating metal layers on thermoplastic substrates for lab-on-a-chip."https://open.metu.edu.tr/handle/11511/99085

Vulto, P., Trietsch, S. J., Yildirim, E. (2022). "Capillary pressure barriers." US Patent 11,344,877.https://patents.google.com/patent/US11344877B2/en

Parsian, M., Mutlu, P., Yildirim, E., Ildiz, C., Ozen, C., Gunduz, U. (2022). "Development of a microfluidic platform to maintain viability of micro-dissected tumor slices in culture." Biomicrofluidics,16(3).https://pubs.aip.org/aip/bmf/article-abstract/16/3/034103/2835467/Development-of-a-microfluidic-platform-to-maintain?redirectedFrom=fulltext

Sen Dogan, B., Yildirim, E., Zorlu, O., Ozgur, E. (2022). "Microfluidic device for selective capture of biological entities." US Patent App. 17/418,868.https://patents.google.com/patent/US20220072552A1/en

Ozkayar, G., Yildirim, E., Zorlu, O. (2022). "Method of microfluidic particle separation enhancement and the device thereof." US Patent App. 17/418,852.https://patents.google.com/patent/US20220072551A1/en

Ahi, E. E., Torul, H., Zengin, A., Sucularlı, F., Yıldırım, E., Selbes, Y., Tamer, U. (2022). "A capillary-driven microfluidic chip for SERS-based hCG detection." Biosensors and Bioelectronics, 195, 113660. doi: 10.1016/j.bios.2021.113660.https://www.sciencedirect.com/science/article/abs/pii/S0956566321006977

Acikgoz, H. N., Karaman, A., Sahin, M. A., Çaylan, Ö., Büke, G. C., Yildirim, E., ... (2021). "Investigation of the effect of chip material on acoustofluidic microparticle manipulation." The Journal of the Acoustical Society of America, 150(4), A62-A62.https://pubs.aip.org/asa/jasa/article/150/4_Supplement/A62/631764/Investigation-of-the-effect-of-chip-material-on

Yalçın, Y. D., Toral, T. B., Sukas, S., Yıldırım, E., Zorlu, Ö., Gündüz, U., Külah, H. (2021). "A microfluidic device enabling drug resistance analysis of leukemia cells via coupled dielectrophoretic detection and impedimetric counting." Scientific Reports, 11, 13193. doi: 10.1038/s41598-021-92688-7.https://www.nature.com/articles/s41598-021-92647-5

Atay, A., Topuz, A., Sarıarslan, B., Yıldırım, E., Charmet, J., Couling, K., & Çetin, B. (2021). "Flow rate-controlled pipetting for microfluidics: second-generation flexible hydraulic reservoir (FHRv2)." Microfluidics and Nanofluidics, 25(1). doi: 10.1007/s10404-020-02402-x.https://link.springer.com/article/10.1007/s10404-020-02402-x

Yalçın, Y. D., Toral, T. B., Sukaş, S., Yildirim, E., Zorlu, Ö., Gündüz, U., ... (2020). "A novel microfluidic method utilizing a hydrofoil structure to improve circulating tumor cell enrichment: Design and analytical validation." Micromachines, 11(11), 981.https://www.mdpi.com/2072-666X/11/11/981

Atik, A. C., Yildirim, E., Külah, H. (2020). "NUMERICAL SIMULATION AND EXPERIMENTAL ANALYSIS OF INERTIAL CELL FOCUSING IN A CONTRACTION-EXPANSION ARRAY (CEA) MICROCHANNEL."https://open.metu.edu.tr/handle/11511/86151

Atik, A. C., Yildirim, E., Külah, H. (2020). "2D phase-field simulation and experimental validation of droplet formation in a flow-focusing junction."https://open.metu.edu.tr/handle/11511/87625

Atik, A. C., Özkan, M. D., Özgür, E., Külah, H., Yildirim, E. (2020). "Modeling and fabrication of electrostatically actuated diaphragms for on-chip valving of MEMS-compatible microfluidic systems." Journal of Micromechanics and Microengineering, 30(11), 115001.https://iopscience.iop.org/article/10.1088/1361-6439/aba16f/meta

Charmet, J., Rodrigues, R., Yıldırım, E., Challa, P. K., Roberts, B., Dallmann, R., ... (2020). "Low-Cost Microfabrication Tool Box." Micromachines, 11(2), 135. doi: 10.3390/mi11020135.https://www.mdpi.com/2072-666X/11/2/135

Özkan, M. D., Aslan, M. K., Atik, A. C., Özgür, E., Yildirim, E., Külah, H. (2020). "Droplet based cell screening system integrated with CMOS image sensor and android-based application."https://open.metu.edu.tr/handle/11511/71926

Eryılmaz, M., Yildirim, E., Tamer, U. (2020). "Lab on a chip: A versatile integration with spectroscopic techniques." Handbook on Miniaturization in Analytical Chemistry, 139-152.https://www.sciencedirect.com/science/article/abs/pii/B9780128197639000076

Dogan, Ü., Kasap, E. N., Sucularlı, F., Yildirim, E., Tamer, U., Cetin, D., ... (2020). "Multiplex enumeration of Escherichia coli and Salmonella enteritidis in a passive capillary microfluidic chip"https://pubs.rsc.org/en/content/articlelanding/2020/ay/d0ay01030h/unauth

Çoğun, F., Arıkan, M. A. S., Yıldırım, E. (2020). "Investigation of process-affected zone in ultrasonic embossing of microchannels on thermoplastic substrates." Journal of Manufacturing Processes, 50, 394-402. doi: 10.1016/j.jmapro.2019.12.055.https://www.sciencedirect.com/science/article/abs/pii/S1526612519304694